University of Minnesota
University of Minnesota
College of Biological Sciences
http://www.cbs.umn.edu/

Dataset

FAB 1 : Forests and Biodiversity Experiment - High density diversity experiment - Experiment 271


SSU amplicons of arbuscular mycorrhizal fungal communities in soils

Years Available: 2016

Principle Investigators

Kennedy, Peter

SSU amplicons of arbuscular mycorrhizal fungal communities in soils

Arbuscular mycorrhizal fungal communities in soils of FAB experiment at Cedar Creek Ecosystem Science Reserve, Minnesota, USA While the relationship between plant and microbial diversity has been well studied in grasslands, less is known about similar relationships in forests, especially for obligately symbiotic arbuscular mycorrhizal (AM) fungi. To assess the effect of varying tree diversity on microbial alpha- and beta-diversity, we sampled soil from plots in a high-density tree diversity experiment in Minnesota, USA three years after establishment. Three of 12 tree species are AM hosts; the other 9 primarily associate with ectomycorrhizal fungi. We used phospho- and neutral lipid fatty acid analysis to characterize the biomass and functional identity of the whole soil bacterial and fungal community and high throughput sequencing to identify the species-level richness and composition of the AM fungal community. Results are published in: Grossman, J. J., Butterfield, A. J., Cavender-Bares, J., Hobbie, S. E., Reich, P. B., Gutknecht, J., & Kennedy, P. G. (2019). Non-symbiotic soil microbes are more strongly influenced by altered tree biodiversity than arbuscular mycorrhizal fungi during initial forest establishment. FEMS microbiology ecology, 95(10). doi:10.1093/femsec/fiz134


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ATTRIBUTES

FieldNameDefinitionUnitCode
1DataSourceInstitution where data is archived
2LinkURLWeb address where the data can be accessed
3DatabaseDatabase within NCBI
4AccessionNational Center for Biotechnology Information accession number
 

SAMPLE DATASET

DataSourceLinkURLDatabaseAccession
NCBIhttps://www.ncbi.nlm.nih.gov/BioProjectPRJNA560250
    

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FAB 1 : Forests and Biodiversity Experiment - High density diversity experiment: SSU amplicons of arbuscular mycorrhizal fungal communities in soils

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